bam.h


Includes:

<stdint.h>, <assert.h>, <stdlib.h>, <string.h>, <stdio.h>, "razf.h", "bgzf.h", "razf.h"





BAM library provides I/O and various operations on manipulating files in the BAM (Binary Alignment/Mapping) or SAM (Sequence Alignment/Map) format. It now supports importing from or exporting to TAM, sorting, merging, generating pileup, and quickly retrieval of reads overlapped with a specified region.





© Genome Research Ltd. Last Updated: Saturday, June 13, 2009
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